GBPVR pausing playback at the beginning of commercial breaks on comskip'd files

[lorddemios]

I recently upgraded to a HD PVR and initially everything was good. Recordings were playing back just fine. However I didn't have the latest version of comskip that supported H264. I upgraded Comskip to version 80.20 and Comskip appeared to be working. Now during playback it pauses at the beginning of a commercial break. The screen sometimes looks slightly pixelated, other times it looks just like I paused it. I can get around this by pushing the fast forward(skip) button once or twice. Then playback continues until the next commercial break is reached. I'm not sure if this is a Comskip or a GBPVR issue. Has anyone else experienced this type of problem?